Revised the setup script

pywafo/setup.py

@@ -58,13 +58,22 @@ setup(
     author_email='wafo@maths.lth.se',
     decription = 'Statistical analysis and simulation of random waves and random loads',
     long_description = info.__doc__,
-	 install_requires = ['numpy>=1.4'],
+	 install_requires = ['numpy>=1.4','numdifftools>=0.2'],
     license = "GPL",
-    url='http://www.maths.lth.se/matstat/wafo/',
+    url='http://code.google.com/p/pywafo/',
 	name = pkg_name,
     package_dir = {'': 'src'},
     packages = find_packages('src'),
     package_data = {'': packagedata}, 
+    classifiers=[
+          'Development Status :: 4 - Beta',
+          'Intended Audience :: Education',
+          'Intended Audience :: Science/Research',
+          'License :: OSI Approved :: GNU General Public License (GPL)',
+          'Operating System :: Microsoft :: Windows',
+          'Programming Language :: Python :: 2.6',
+          'Topic :: Scientific/Engineering :: Mathematics',
+          ],
     #packages = [package_name,] + list(subpackagesfull),
     #package_data = {package_name: packagedata},
     #package_data = {'': ['wafo.cfg']},

pywafo/src/Wafo.egg-info/PKG-INFO

@@ -2,13 +2,13 @@ Metadata-Version: 1.0
 Name: wafo
 Version: 0.11
 Summary: UNKNOWN
-Home-page: http://www.maths.lth.se/matstat/wafo/
+Home-page: http://code.google.com/p/pywafo/
 Author: WAFO-group
 Author-email: wafo@maths.lth.se
 License: GPL
 Description: 
         WAFO
-        =====
+        ====
            WAFO is a toolbox Python routines for statistical analysis and simulation of random waves and random loads. 
            WAFO is freely redistributable software, see WAFO licence, cf. the GNU General Public License (GPL) and
            contain tools for:
@@ -30,57 +30,37 @@ Description:
         -Kernel density estimation
         -Hidden markov models
         
-         WAFO consists of several modules with short descriptions below.
+         WAFO consists of several subpackages and classes with short descriptions below.
-         The modules SPECTRUM, COVARIANCE, TRANSFORM, WAVEMODELS, and MULTIDIM are 
-         mainly for oceanographic applications.
-         The modules CYCLES, MARKOV, and DAMAGE are mainly for fatigue problems. 
-         The contents file for each module is shown by typing 'help module-name' 
-         Type 'help fatigue' for a presentation of all routines related to fatigue.
         
-         The paths to the modules are initiated by the function 'initwafo'.
+         Classes:
-        
+         TimeSeries  - Data analysis of time series. Example: extraction of 
-         ONEDIM     - Data analysis of time series. Example: extraction of 
                       turning points, estimation of spectrum and covariance function. 
                       Estimation transformation used in transformed Gaussian model.
-         COVARIANCE - Computation of spectral functions, linear 
+         CovData     - Computation of spectral functions, linear 
                       and non-linear time series simulation. 
-         SPECTRUM   - Computation of spectral moments and covariance functions, linear 
+         SpecData    - Computation of spectral moments and covariance functions, linear 
                       and non-linear time series simulation. 
                       Ex: common spectra implemented, directional spectra, 
                       bandwidth measures, exact distributions for wave characteristics.
-         TRANSFORM  - Modelling with linear or transformed Gaussian waves. Ex: 
+          
-                      
+                   
-         WAVEMODELS - Models for distributions of wave characteristics found in 
+         CyclePairs  - Cycle counting, discretization, and crossings, calculation of 
-                      the literature. Ex: parametric models for breaking 
-                      limited wave heights.
-         MULTIDIM   - Multi-dimensional time series analysis.  (Under construction)
-         CYCLES     - Cycle counting, discretization, and crossings, calculation of 
                       damage. Simulation of discrete Markov chains, switching Markov
                       chains, harmonic oscillator. Ex:  Rainflow cycles and matrix, 
                       discretization of loads. Damage of a rainflow count or 
                       matrix, damage matrix, S-N plot.
-         MARKOV     - Routines for Markov loads, switching Markov loads, and 
+         
-                      their connection to rainflow cycles.
+         
-         DAMAGE     - Calculation of damage. Ex: Damage of a rainflow count or 
+        Subpackages:
-                      matrix, damage matrix, S-N plot.
+         TRANSFORM  - Modelling with linear or transformed Gaussian waves. Ex:
-         SIMTOOLS   - Simulation of random processes. Ex: spectral simulation, 
+         STATS      - Statistical tools and extreme-value distributions.
-                      simulation of discrete Markov chains, switching Markov
-                      chains, harmonic oscillator
-         STATISTICS - Statistical tools and extreme-value distributions.
                       Ex: generation of random numbers, estimation of parameters,
                       evaluation of pdf and cdf
          KDETOOLS   - Kernel-density estimation.
-         MISC       - Miscellaneous routines. Ex: numerical integration, smoothing 
+         MISC       - Miscellaneous routines. 
-                      spline, binomial coefficient, water density.
-         WDEMOS     - WAFO demos. 
          DOCS       - Documentation of toolbox, definitions. An overview is given 
                       in the routine wafomenu. 
          DATA       - Measurements from marine applications.
-         PAPERS     - Commands that generate figures in selected scientific 
-                      publications.
-         SOURCE     - Fortran and C files. Information on compilation.
-         EXEC       - Executable files (cf. SOURCE), pre-compiled for Solaris, 
-                      Alpha-Dec or Windows. 
          
          WAFO homepage: <http://www.maths.lth.se/matstat/wafo/>
          On the WAFO home page you will find:
@@ -90,3 +70,10 @@ Description:
           - List of publications related to WAFO.
         
 Platform: UNKNOWN
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Education
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: GNU General Public License (GPL)
+Classifier: Operating System :: Microsoft :: Windows
+Classifier: Programming Language :: Python :: 2.6
+Classifier: Topic :: Scientific/Engineering :: Mathematics

pywafo/src/Wafo.egg-info/SOURCES.txt

@@ -38,7 +38,6 @@ src/wafo/rindmod.pyd
 src/wafo/sg_filter.py
 src/wafo/test_ppimport.py
 src/wafo/wafodata.py
-src/wafo/weaver.py
 src/wafo.egg-info/SOURCES.txt
 src/wafo/covariance/__init__.py
 src/wafo/covariance/core.py
@@ -64,6 +63,7 @@ src/wafo/source/c_codes/build_all.py
 src/wafo/source/c_codes/c_functions.c
 src/wafo/source/c_codes/c_library.pyd
 src/wafo/source/c_codes/c_library.pyf
+src/wafo/source/c_codes/old/build_all_.py
 src/wafo/source/c_codes/old/diffsumfunq.pyd
 src/wafo/source/c_codes/old/diffsumfunq.pyf
 src/wafo/source/c_codes/old/disufq.pyf
@@ -84,6 +84,7 @@ src/wafo/source/cov2XXXpdf/bounds/cov2acdfb.f
 src/wafo/source/cov2XXXpdf/bounds/cov2mmpdfb.f
 src/wafo/source/cov2XXXpdf/bounds/cov2tccpdfb.f
 src/wafo/source/cov2XXXpdf/bounds/cov2tthpdfb.f
+src/wafo/source/mreg/build_all_.py
 src/wafo/source/mreg/checkmod.mod
 src/wafo/source/mreg/cov2mmpdfmod.mod
 src/wafo/source/mreg/cov2mmpdfreg.f
@@ -260,6 +261,7 @@ src/wafo/spectrum/models.py
 src/wafo/stats/__init__.py
 src/wafo/stats/core.py
 src/wafo/stats/distributions.py
+src/wafo/stats/distributions_juli2010.py
 src/wafo/stats/estimation.py
 src/wafo/stats/misc.py
 src/wafo/stats/plotbackend.py

pywafo/src/wafo/info.py

@@ -1,6 +1,6 @@
 """
 WAFO
-=====
+====
    WAFO is a toolbox Python routines for statistical analysis and simulation of random waves and random loads. 
    WAFO is freely redistributable software, see WAFO licence, cf. the GNU General Public License (GPL) and
    contain tools for:
@@ -22,57 +22,37 @@ Statistics
 -Kernel density estimation
 -Hidden markov models
 
- WAFO consists of several modules with short descriptions below.
+ WAFO consists of several subpackages and classes with short descriptions below.
- The modules SPECTRUM, COVARIANCE, TRANSFORM, WAVEMODELS, and MULTIDIM are 
+
- mainly for oceanographic applications.
+ Classes:
- The modules CYCLES, MARKOV, and DAMAGE are mainly for fatigue problems. 
+ TimeSeries  - Data analysis of time series. Example: extraction of 
- The contents file for each module is shown by typing 'help module-name' 
- Type 'help fatigue' for a presentation of all routines related to fatigue.
-
- The paths to the modules are initiated by the function 'initwafo'.
-
- ONEDIM     - Data analysis of time series. Example: extraction of 
               turning points, estimation of spectrum and covariance function. 
               Estimation transformation used in transformed Gaussian model.
- COVARIANCE - Computation of spectral functions, linear 
+ CovData     - Computation of spectral functions, linear 
               and non-linear time series simulation. 
- SPECTRUM   - Computation of spectral moments and covariance functions, linear 
+ SpecData    - Computation of spectral moments and covariance functions, linear 
               and non-linear time series simulation. 
               Ex: common spectra implemented, directional spectra, 
               bandwidth measures, exact distributions for wave characteristics.
- TRANSFORM  - Modelling with linear or transformed Gaussian waves. Ex: 
+  
-              
+           
- WAVEMODELS - Models for distributions of wave characteristics found in 
+ CyclePairs  - Cycle counting, discretization, and crossings, calculation of 
-              the literature. Ex: parametric models for breaking 
-              limited wave heights.
- MULTIDIM   - Multi-dimensional time series analysis.  (Under construction)
- CYCLES     - Cycle counting, discretization, and crossings, calculation of 
               damage. Simulation of discrete Markov chains, switching Markov
               chains, harmonic oscillator. Ex:  Rainflow cycles and matrix, 
               discretization of loads. Damage of a rainflow count or 
-              matrix, damage matrix, S-N plot.
+              matrix, damage matrix, S-N plot.
- MARKOV     - Routines for Markov loads, switching Markov loads, and 
+ 
-              their connection to rainflow cycles.
+ 
- DAMAGE     - Calculation of damage. Ex: Damage of a rainflow count or 
+Subpackages:
-              matrix, damage matrix, S-N plot.
+ TRANSFORM  - Modelling with linear or transformed Gaussian waves. Ex:
- SIMTOOLS   - Simulation of random processes. Ex: spectral simulation, 
+ STATS      - Statistical tools and extreme-value distributions.
-              simulation of discrete Markov chains, switching Markov
-              chains, harmonic oscillator
- STATISTICS - Statistical tools and extreme-value distributions.
               Ex: generation of random numbers, estimation of parameters,
               evaluation of pdf and cdf
  KDETOOLS   - Kernel-density estimation.
- MISC       - Miscellaneous routines. Ex: numerical integration, smoothing 
+ MISC       - Miscellaneous routines. 
-              spline, binomial coefficient, water density.
- WDEMOS     - WAFO demos. 
  DOCS       - Documentation of toolbox, definitions. An overview is given 
               in the routine wafomenu. 
  DATA       - Measurements from marine applications.
- PAPERS     - Commands that generate figures in selected scientific 
-              publications.
- SOURCE     - Fortran and C files. Information on compilation.
- EXEC       - Executable files (cf. SOURCE), pre-compiled for Solaris, 
-              Alpha-Dec or Windows. 
  
  WAFO homepage: <http://www.maths.lth.se/matstat/wafo/>
  On the WAFO home page you will find: