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@ -915,7 +915,7 @@ class CyclePairs(PlotData):
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# endfor
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# endfor
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# endif method 2
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# endif method 2
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return Fsmooth,h
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return Fsmooth, h
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def cycle_matrix(self, param=(), ddef=1, method=0, h=None, NOsubzero=0, alpha=0.5):
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def cycle_matrix(self, param=(), ddef=1, method=0, h=None, NOsubzero=0, alpha=0.5):
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"""CC2CMAT Calculates the cycle count matrix from a cycle count.
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"""CC2CMAT Calculates the cycle count matrix from a cycle count.
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@ -965,7 +965,7 @@ class CyclePairs(PlotData):
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# Smooth by using Kernel estimator ?
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# Smooth by using Kernel estimator ?
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#if method >= 1:
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# if method >= 1:
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# F, h = smoothcmat(F,method, h, NOsubzero, alpha)
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# F, h = smoothcmat(F,method, h, NOsubzero, alpha)
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return CycleMatrix(F, u, u)
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return CycleMatrix(F, u, u)
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@ -988,7 +988,7 @@ class CyclePairs(PlotData):
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See also cc2cmat, cc2dcc, cmatplot
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See also cc2cmat, cc2dcc, cmatplot
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"""
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"""
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F = np.zeros((n, n));
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F = np.zeros((n, n))
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cp1, cp2 = dcp
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cp1, cp2 = dcp
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for i, j in zip(cp1, cp2):
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for i, j in zip(cp1, cp2):
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F[i, j] += 1
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F[i, j] += 1
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