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Python

# coding: utf-8
# In[64]:
import struct
import matplotlib.pyplot as plt
import math
from py_rmatools import rma
plt.rcParams.update({'figure.max_open_warning': 0})
# In[65]:
meshFilename = 'HWQ010.rm1'
channelWidth = 100
RMAfilename = 'HWQ277_2010_WQ'
#If RMA11
constNum = [1,2,3,5,6,7,8,10,11,13,14,15,18]
# In[66]:
def isElementOneD(nodelist):
if len(nodelist) == 2:
return True
return False
def isElementSquare(nodelist):
if len(nodelist) == 4:
return True
return False
def square2Triangle(ElementNum):
nodelist = ElementDict[ElementNum]
if isElementSquare(nodelist):
ElementDict[ElementNum] = [nodelist[0], nodelist[1], nodelist[2]]
ElementList.append(max(ElementList) + 1)
ElementDict[ElementList[-1]]= [nodelist[0], nodelist[2], nodelist[3]]
def oneD2triangle(ElementNum):
if isElementOneD(ElementDict[ElementNum]):
nAe = ElementDict[ElementNum][0] #nAe Node A existing
nBe = ElementDict[ElementNum][1]
if not nAe in node1Dduplicate: node1Dduplicate[nAe] = []
if not nBe in node1Dduplicate: node1Dduplicate[nBe] = []
xA = nodeDict[nAe][0]
xB = nodeDict[nBe][0]
yA = nodeDict[nAe][1]
yB = nodeDict[nBe][1]
normalVec = [-(yB - yA),(xB - xA)]
dist = math.sqrt(normalVec[0]**2 + normalVec[1]**2)
normalVec[0] = normalVec[0] / dist
normalVec[1] = normalVec[1] / dist
xA2 = xA + channelWidth * normalVec[0]
xB2 = xB + channelWidth * normalVec[0]
yA2 = yA + channelWidth * normalVec[1]
yB2 = yB + channelWidth * normalVec[1]
nA = max(NodeList) + 1
nB = max(NodeList) + 2
node1Dduplicate[nAe].append(nA)
node1Dduplicate[nBe].append(nB)
node2nodevalue[nA] = nAe
node2nodevalue[nB] = nBe
NodeList.append(nA)
NodeList.append(nB)
nodeDict[nA] = [xA2, yA2, -1.01]
nodeDict[nB] = [xB2, yB2, -1.01]
newEle = max(ElementList) + 1
ElementList .append(newEle)
ElementDict[ElementNum] = [nAe, nA, nBe]
ElementDict[newEle] = [nA, nB, nBe]
def RMA11toSerafin():
f = open('{}.slf'.format(RMAfilename), 'wb')
f.write(struct.pack(">l",80))
str='{0: >80}'.format('SERAFIN ')
f.write(str.encode('ascii'))
f.write(struct.pack(">l",80))
f.write(struct.pack(">l",8))
f.write(struct.pack(">l",len(constNum)))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",8))
for c in constName:
f.write(struct.pack(">l",32))
str='{0: <32}'.format(c)
f.write(str.encode('ascii'))
f.write(struct.pack(">l",32))
f.write(struct.pack(">l",40))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",40))
f.write(struct.pack(">l",24))
f.write(struct.pack(">l",R.year))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",24))
f.write(struct.pack(">l",16))
f.write(struct.pack(">l",len(ElementList)))
f.write(struct.pack(">l",len(NodeList)))
f.write(struct.pack(">l",3))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",16))
f.write(struct.pack(">l",len(ElementList)*3*4))
for el in ElementList:
for nd in ElementDict[el]:
f.write(struct.pack(">l",nodeOrdered[nd]))
f.write(struct.pack(">l",len(ElementList)*3*4))
f.write(struct.pack(">l",len(NodeList)))
for i in range(0,len(NodeList)):
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",len(NodeList)))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
f.write(struct.pack(">f",value[0]))
f.write(struct.pack(">l",len(NodeList)*4))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
f.write(struct.pack(">f",value[1]))
f.write(struct.pack(">l",len(NodeList)*4))
while R.next():
#for i in range(3):
f.write(struct.pack(">l",4))
f.write(struct.pack(">f",R.time * 3600))
f.write(struct.pack(">l",4))
for c in constNum:
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
if key in node2nodevalue.keys():
f.write(struct.pack(">f",R.constit[c][node2nodevalue[key]]))
else:
f.write(struct.pack(">f",R.constit[c][key]))
f.write(struct.pack(">l",len(NodeList)*4))
#R.next()
f.close()
def RMA2toSerafin():
f = open('{}.slf'.format(RMAfilename), 'wb')
f.write(struct.pack(">l",80))
str='{0: >80}'.format('SERAFIN ')
f.write(str.encode('ascii'))
f.write(struct.pack(">l",80))
f.write(struct.pack(">l",8))
f.write(struct.pack(">l",len(constName)))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",8))
for c in constName:
f.write(struct.pack(">l",32))
str='{0: <32}'.format(c)
f.write(str.encode('ascii'))
f.write(struct.pack(">l",32))
f.write(struct.pack(">l",40))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",40))
f.write(struct.pack(">l",24))
f.write(struct.pack(">l",R.year))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",24))
f.write(struct.pack(">l",16))
f.write(struct.pack(">l",len(ElementList)))
f.write(struct.pack(">l",len(NodeList)))
f.write(struct.pack(">l",3))
f.write(struct.pack(">l",1))
f.write(struct.pack(">l",16))
f.write(struct.pack(">l",len(ElementList)*3*4))
for el in ElementList:
for nd in ElementDict[el]:
f.write(struct.pack(">l",nodeOrdered[nd]))
f.write(struct.pack(">l",len(ElementList)*3*4))
f.write(struct.pack(">l",len(NodeList)))
for i in range(0,len(NodeList)):
f.write(struct.pack(">l",0))
f.write(struct.pack(">l",len(NodeList)))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
f.write(struct.pack(">f",value[0]))
f.write(struct.pack(">l",len(NodeList)*4))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
f.write(struct.pack(">f",value[1]))
f.write(struct.pack(">l",len(NodeList)*4))
while R.next():
f.write(struct.pack(">l",4))
f.write(struct.pack(">f",R.time * 3600))
f.write(struct.pack(">l",4))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
if key in node2nodevalue.keys():
f.write(struct.pack(">f",R.xvel[node2nodevalue[key]]))
else:
f.write(struct.pack(">f",R.xvel[key]))
f.write(struct.pack(">l",len(NodeList)*4))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
if key in node2nodevalue.keys():
f.write(struct.pack(">f",R.yvel[node2nodevalue[key]]))
else:
f.write(struct.pack(">f",R.yvel[key]))
f.write(struct.pack(">l",len(NodeList)*4))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
if key in node2nodevalue.keys():
f.write(struct.pack(">f",R.depth[node2nodevalue[key]]))
else:
f.write(struct.pack(">f",R.depth[key]))
f.write(struct.pack(">l",len(NodeList)*4))
f.write(struct.pack(">l",len(NodeList)*4))
for key, value in nodeDict.items():
if key in node2nodevalue.keys():
f.write(struct.pack(">f",R.elevation[node2nodevalue[key]]))
else:
f.write(struct.pack(">f",R.elevation[key]))
f.write(struct.pack(">l",len(NodeList)*4))
R.next()
f.close()
# In[67]:
#Read mesh file and extract node (except mid node) and elements - plus convert 1D element to 2D for vizualisation
NodeList = []
ElementList = []
ElementDict = {}
nodeDict = {}
node1Dduplicate = {} #Original Number: List of Duplicates
node2nodevalue = {} #link between the node number and the node value to use
#(e.g. if node 10 is a 1D node: 10 is not duplicate so {1:1},
#but node 2050 (duplicate of 10) (1D to 2D) the value of the duplicated
#node will be the same as the original so we might have {2050: 10})
with open(meshFilename) as f:
line = f.readline()
line = f.readline()
line = f.readline()
line = f.readline()
cpt = 1
while line and line != ' 9999\n':
temp = line.split()
ElementDict[int(temp[0])] = [int(temp[i]) for i in range(1,9,2) if temp[i] != '0' and int(temp[9]) < 100]
ElementList.append(int(temp[0]))
line = f.readline()
for key, value in ElementDict.items():
NodeList.extend(value)
NodeList = list(set(NodeList))
line = f.readline()
while line and line != ' 9999\n':
temp = line.split()
if int(temp[0]) in NodeList:
nodeDict[int(temp[0])] = [float(temp[1]),float(temp[2]),float(temp[3])]
line = f.readline()
for e in ElementList:
oneD2triangle(e)
square2Triangle(e)
for key in list(ElementDict): #Remove Special Element 902.....
if len(ElementDict[key]) != 3:
print(key, ElementDict[key])
ElementDict.pop(key)
ElementList.remove(key)
nodeOrdered = {}
cpt = 1
for key, value in nodeDict.items():
nodeOrdered[key] = cpt
cpt +=1
# # Open and Read First Step of the RMA File and Save a Serafin
# In[72]:
R=rma()
R.open(RMAfilename)
R.next()
if R.type==b'RMA11 ':
constName = []
for c in constNum:
constName.append(R.constit_name[c].decode("utf-8"))
RMA11toSerafin()
if R.type==b'RMA2 ':
constName = ['X-VEL','Y-VEL','DEPTH','FREE SURFACE']
RMA2toSerafin()