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Python

#==========================================================#
#==========================================================#
# Download L5, L7, L8, S2 images of a given area
#==========================================================#
#==========================================================#
#==========================================================#
# Initial settings
#==========================================================#
import os
import numpy as np
import matplotlib.pyplot as plt
import pdb
import ee
# other modules
from osgeo import gdal, ogr, osr
from urllib.request import urlretrieve
import zipfile
from datetime import datetime
import pytz
import pickle
# import own modules
import functions.utils as utils
import functions.sds as sds
np.seterr(all='ignore') # raise/ignore divisions by 0 and nans
ee.Initialize()
#==========================================================#
# Location
#==========================================================#
## location (Narrabeen-Collaroy beach)
sitename = 'NARRA'
polygon = [[[151.301454, -33.700754],
[151.311453, -33.702075],
[151.307237, -33.739761],
[151.294220, -33.736329],
[151.301454, -33.700754]]];
# initialise metadata dictionnary (stores timestamps and georefencing accuracy of each image)
metadata = dict([])
# create directories
try:
os.makedirs(os.path.join(os.getcwd(), 'data',sitename))
except:
print('directory already exists')
#%%
#==========================================================#
#==========================================================#
# S2
#==========================================================#
#==========================================================#
# define filenames for images
suffix = '.tif'
filepath = os.path.join(os.getcwd(), 'data', sitename, 'S2')
try:
os.makedirs(os.path.join(filepath, '10m'))
os.makedirs(os.path.join(filepath, '20m'))
os.makedirs(os.path.join(filepath, '60m'))
except:
print('directory already exists')
#==========================================================#
# Select L2 collection
#==========================================================#
satname = 'S2'
input_col = ee.ImageCollection('COPERNICUS/S2')
# filter by location
flt_col = input_col.filterBounds(ee.Geometry.Polygon(polygon))
n_img = flt_col.size().getInfo()
print('Number of images covering ' + sitename, n_img)
im_all = flt_col.getInfo().get('features')
#==========================================================#
# Main loop trough images
#==========================================================#
timestamps = []
acc_georef = []
all_names = []
im_epsg = []
for i in range(n_img):
# find each image in ee database
im = ee.Image(im_all[i].get('id'))
im_dic = im.getInfo()
im_bands = im_dic.get('bands')
t = im_dic['properties']['system:time_start']
im_timestamp = datetime.fromtimestamp(t/1000, tz=pytz.utc)
im_date = im_timestamp.strftime('%Y-%m-%d-%H-%M-%S')
# delete dimensions key from dictionnary, otherwise the entire image is extracted
for j in range(len(im_bands)): del im_bands[j]['dimensions']
# bands for S2
bands10 = [im_bands[1], im_bands[2], im_bands[3], im_bands[7]]
bands20 = [im_bands[11]]
bands60 = [im_bands[15]]
# filenames
filename10 = im_date + '_' + satname + '_' + sitename + '_' + '10m' + suffix
filename20 = im_date + '_' + satname + '_' + sitename + '_' + '20m' + suffix
filename60 = im_date + '_' + satname + '_' + sitename + '_' + '60m' + suffix
print(i)
if any(filename10 in _ for _ in all_names):
continue
all_names.append(filename10)
local_data = sds.download_tif(im, polygon, bands10, filepath)
os.rename(local_data, os.path.join(filepath, '10m', filename10))
local_data = sds.download_tif(im, polygon, bands20, filepath)
os.rename(local_data, os.path.join(filepath, '20m', filename20))
local_data = sds.download_tif(im, polygon, bands60, filepath)
os.rename(local_data, os.path.join(filepath, '60m', filename60))
timestamps.append(im_timestamp)
im_epsg.append(int(im_dic['bands'][0]['crs'][5:]))
try:
if im_dic['properties']['GEOMETRIC_QUALITY_FLAG'] == 'PASSED':
acc_georef.append(1)
else:
acc_georef.append(0)
except:
acc_georef.append(0)
# sort timestamps and georef accuracy (dowloaded images are sorted by date in directory)
timestamps_sorted = sorted(timestamps)
idx_sorted = sorted(range(len(timestamps)), key=timestamps.__getitem__)
acc_georef_sorted = [acc_georef[j] for j in idx_sorted]
im_epsg_sorted = [im_epsg[j] for j in idx_sorted]
metadata[satname] = {'dates':timestamps_sorted, 'acc_georef':acc_georef_sorted, 'epsg':im_epsg_sorted}
#%% save metadata
filepath = os.path.join(os.getcwd(), 'data', sitename)
with open(os.path.join(filepath, sitename + '_metadata' + '.pkl'), 'wb') as f:
pickle.dump(metadata, f)