diff --git a/README.md b/README.md index d04f6f3..c066d41 100644 --- a/README.md +++ b/README.md @@ -25,12 +25,12 @@ Using the [Anaconda distribution](https://www.anaconda.com/products/individual) 4. Update or create a new conda environment called "coastsnap" with the required dependencies. This is (almost) the same environment as for the Leaman CoastSnap Toolbox, so you may already have it. If you're not sure, run: `conda info --envs` and look for "coastsnap". If you already have the environment, run: `conda env update --name coastsnap --file environment.yml` to update it. Otherwise, create the environment by runnning: `conda env create -f environment.yml`. 5. Check if you can activate the conda environment with `activate coastsnap`. If not, you may need to update your environment `Path` variable to include paths to the Anaconda install, like the following: - ```sh - C:\Users\z5079346\Applications\Anaconda - C:\Users\z5079346\Applications\Anaconda\Scripts - C:\Users\z5079346\Applications\Anaconda\Library\bin - ``` - If `activate coastsnap` is still not working, you will have to edit each of the .bat files and substitute the first line `call activate coastsnap` with the direct path to the `activate.bat` file, such as "C:\Users\z5079346\Applications\Anaconda\Scripts\activate.bat". Substitute the third line `call deactivate` with the path to `deactivate.bat` + ```sh + C:\Users\z5079346\Applications\Anaconda + C:\Users\z5079346\Applications\Anaconda\Scripts + C:\Users\z5079346\Applications\Anaconda\Library\bin + ``` + If `activate coastsnap` is still not working, you will have to edit each of the .bat files and substitute the first line `call activate coastsnap` with the direct path to the `activate.bat` file, such as "C:\Users\z5079346\Applications\Anaconda\Scripts\activate.bat". Substitute the third line `call deactivate` with the path to `deactivate.bat` ### Demo (optional) The following is a demo to make sure all of the code is working and for the user to get a sense of the intended workflow. It'll take approx. 10 mins (assuming everything works). The code will run on a demo CoastSnap directory (`CoastSnap_DEMO`) with 3 sites.