diff --git a/coastsnap/batch_photoshop_registration.bat b/coastsnap/batch_photoshop_registration.bat
new file mode 100644
index 0000000..8950e3c
--- /dev/null
+++ b/coastsnap/batch_photoshop_registration.bat
@@ -0,0 +1,11 @@
+GOTO comment
+
+The following command runs the photoshop javascript file "photoshop_registration_all_sites.jsx" that is in this directory.
+
+You may need to change the photoshop version (year) in the command below to your version 
+E.g. "\Adobe Photoshop 2022\" may need to be "\Adobe Photoshop 2021\"
+
+:comment
+
+
+"C:\Program Files\Adobe\Adobe Photoshop 2022\Photoshop.exe" -r "%~dp0photoshop_registration_all_sites.jsx"
\ No newline at end of file
diff --git a/coastsnap/batch_spotteron_download.bat b/coastsnap/batch_spotteron_download.bat
new file mode 100644
index 0000000..7b8e297
--- /dev/null
+++ b/coastsnap/batch_spotteron_download.bat
@@ -0,0 +1,3 @@
+call activate coastsnap 
+python "%~dp0spotteron_batch_download.py"
+call conda deactivate
\ No newline at end of file
diff --git a/coastsnap/batch_tag_registered.bat b/coastsnap/batch_tag_registered.bat
new file mode 100644
index 0000000..33d3f6b
--- /dev/null
+++ b/coastsnap/batch_tag_registered.bat
@@ -0,0 +1,3 @@
+call activate coastsnap 
+python "%~dp0tag_registered.py"
+call conda deactivate
\ No newline at end of file
diff --git a/coastsnap/photoshop_registration.bat b/coastsnap/photoshop_registration.bat
deleted file mode 100644
index 49bb5f2..0000000
--- a/coastsnap/photoshop_registration.bat
+++ /dev/null
@@ -1 +0,0 @@
-"C:\Program Files\Adobe\Adobe Photoshop 2022\Photoshop.exe" -r "C:\Users\z5079346\OneDrive - UNSW\Projects\Coastsnap\coastsnap\photoshop_registration_all_sites.jsx"
\ No newline at end of file
diff --git a/coastsnap/photoshop_registration_all_sites.jsx b/coastsnap/photoshop_registration_all_sites.jsx
index e2d127d..c6d552a 100644
--- a/coastsnap/photoshop_registration_all_sites.jsx
+++ b/coastsnap/photoshop_registration_all_sites.jsx
@@ -29,12 +29,12 @@ var site_names = csv_data.toString().split(",")
 // Retrieve images parent directory from CoastSnap_Sites.csv
 var parent_folder_path = File(site_names[9]);
 
-var batch_images_to_register = []; // Used in exportLayersToPNG
+var batch_images_to_register = []; // Used in exportLayersToJPEG
 
 // Loop through sites
 for(var i=5; i<site_names.length; i+=5) {
     var site_name = site_names[i];
-    var site_path = parent_folder_path + "/" + site_name;
+    var site_path = parent_folder_path + "/Images/" + site_name;
 
     // Retrieve target and seed images for the site
     var target_folder = new Folder(site_path + '/Target Image');
@@ -97,7 +97,7 @@ function batch_register_images(batchIndex, site_path, site_name, images_to_regis
     var target_height = target_size[1];
 
     savePhotoshopDocument(site_path, site_name);
-    exportLayersToPNG(target_width, target_height, batch_images_to_register, seed_images); // Won't overwrite images that already exist
+    exportLayersToJPEG(target_width, target_height, batch_images_to_register, seed_images); // Won't overwrite images that already exist
 
     app.activeDocument.close(SaveOptions.DONOTSAVECHANGES)
 }
@@ -233,7 +233,7 @@ function savePhotoshopDocument(site_path, site_name) {
 // EXPORT LAYERS TO IMAGES
 
 // $.evalFile(File(app.path + '/Presets/Scripts/Export Layers To Files.jsx'));
-function exportLayersToPNG(target_width, target_height, batch_images_to_register, seed_images){
+function exportLayersToJPEG(target_width, target_height, batch_images_to_register, seed_images){
     if(!documents.length) return;
     var doc = activeDocument;
     var oldPath = activeDocument.path;
@@ -317,7 +317,7 @@ function exportLayersToPNG(target_width, target_height, batch_images_to_register
         }
         //activeDocument.trim(TrimType.TRANSPARENT,true,true,true,true);
         var saveFile = File(path +"/Photoshop/"+year+"/"+lname);
-        SavePNG(saveFile);
+        SaveJPEG(saveFile);
         app.activeDocument.close(SaveOptions.DONOTSAVECHANGES);
     }
 };
@@ -334,7 +334,7 @@ function dupLayers() {
     executeAction( charIDToTypeID('Mk  '), desc143, DialogModes.NO );
 };
     
-function SavePNG(saveFile){
+function SaveJPEG(saveFile){
     var pngOpts = new ExportOptionsSaveForWeb; 
     pngOpts.format = SaveDocumentType.JPEG;
     pngOpts.PNG8 = false; 
diff --git a/coastsnap/photoshop_registration_one_site.jsx b/coastsnap/photoshop_registration_one_site.jsx
index fd9bfc8..84609d5 100644
--- a/coastsnap/photoshop_registration_one_site.jsx
+++ b/coastsnap/photoshop_registration_one_site.jsx
@@ -31,7 +31,7 @@ var parent_folder_path = File(site_names[9]);
 
 var batch_images_to_register = []; // Used in exportLayersToPNG
 
-var site_path = parent_folder_path + "/" + site_name;
+var site_path = parent_folder_path + "/Images/" + site_name;
 
 // Retrieve target and seed images for the site
 var target_folder = new Folder(site_path + '/Target Image');
diff --git a/coastsnap/spotteron_batch_download.bat b/coastsnap/spotteron_batch_download.bat
deleted file mode 100644
index d3fef71..0000000
--- a/coastsnap/spotteron_batch_download.bat
+++ /dev/null
@@ -1,3 +0,0 @@
-call activate coastsnap 
-python "C:\Users\z5079346\OneDrive - UNSW\Projects\Coastsnap\coastsnap\spotteron_batch_download.py"
-call conda deactivate
\ No newline at end of file