''' Created on 23. des. 2016 @author: pab ''' from __future__ import absolute_import, division, print_function import unittest import numpy as np from numpy.testing import assert_allclose from numpy import inf import wafo.kdetools.kernels as wkk from wafo.kdetools.tests.data import DATA3D class TestKernels(unittest.TestCase): def setUp(self): self.names = ['epanechnikov', 'biweight', 'triweight', 'logistic', 'p1epanechnikov', 'p1biweight', 'p1triweight', 'triangular', 'gaussian', 'rectangular', 'laplace'] def test_stats(self): truth = { 'biweight': (0.14285714285714285, 0.7142857142857143, 22.5), 'logistic': (3.289868133696453, 1./6, 0.023809523809523808), 'p1biweight': (0.14285714285714285, 0.7142857142857143, 22.5), 'triangular': (0.16666666666666666, 0.6666666666666666, inf), 'gaussian': (1, 0.28209479177387814, 0.21157109383040862), 'epanechnikov': (0.2, 0.6, inf), 'triweight': (0.1111111111111111, 0.8158508158508159, inf), 'p1triweight': (0.1111111111111111, 0.8158508158508159, inf), 'p1epanechnikov': (0.2, 0.6, inf), 'rectangular': (0.3333333333333333, 0.5, inf), 'laplace': (2, 0.25, inf)} for name in self.names: kernel = wkk.Kernel(name) assert_allclose(kernel.stats(), truth[name]) # truth[name] = kernel.stats() # print(truth) def test_norm_factors_1d(self): truth = { 'biweight': 1.0666666666666667, 'logistic': 1.0, 'p1biweight': 1.0666666666666667, 'triangular': 1.0, 'gaussian': 2.5066282746310002, 'epanechnikov': 1.3333333333333333, 'triweight': 0.91428571428571426, 'laplace': 2, 'p1triweight': 0.91428571428571426, 'p1epanechnikov': 1.3333333333333333, 'rectangular': 2.0} for name in self.names: kernel = wkk.Kernel(name) assert_allclose(kernel.norm_factor(d=1, n=20), truth[name]) # truth[name] = kernel.norm_factor(d=1, n=20) def test_effective_support(self): truth = {'biweight': (-1.0, 1.0), 'logistic': (-7.0, 7.0), 'p1biweight': (-1.0, 1.0), 'triangular': (-1.0, 1.0), 'gaussian': (-4.0, 4.0), 'epanechnikov': (-1.0, 1.0), 'triweight': (-1.0, 1.0), 'p1triweight': (-1.0, 1.0), 'p1epanechnikov': (-1.0, 1.0), 'rectangular': (-1.0, 1.0), 'laplace': (-7.0, 7.0)} for name in self.names: kernel = wkk.Kernel(name) assert_allclose(kernel.effective_support(), truth[name]) # truth[name] = kernel.effective_support() # print(truth) # self.assertTrue(False) def test_that_kernel_is_a_pdf(self): for name in self.names: kernel = wkk.Kernel(name) xmin, xmax = kernel.effective_support() x = np.linspace(xmin, xmax, 4*1024+1) m0 = kernel.norm_factor(d=1, n=1) pdf = kernel(x)/m0 # print(name) # print(pdf[0], pdf[-1]) # print(np.trapz(pdf, x) - 1) assert_allclose(np.trapz(pdf, x), 1, 1e-2) # self.assertTrue(False) class TestSmoothing(unittest.TestCase): def setUp(self): self.data = DATA3D self.gauss = wkk.Kernel('gaussian') def test_hns(self): hs = self.gauss.hns(self.data) assert_allclose(hs, [0.18154437, 0.36207987, 0.37396219]) def test_hos(self): hs = self.gauss.hos(self.data) assert_allclose(hs, [0.195209, 0.3893332, 0.40210988]) def test_hms(self): hs = self.gauss.hmns(self.data) assert_allclose(hs, [[3.25196193e-01, -2.68892467e-02, 3.18932448e-04], [-2.68892467e-02, 3.91283306e-01, 2.38654678e-02], [3.18932448e-04, 2.38654678e-02, 4.05123874e-01]]) hs = self.gauss.hmns(self.data[0]) assert_allclose(hs, self.gauss.hns(self.data[0])) hs = wkk.Kernel('epan').hmns(self.data) assert_allclose(hs, [[8.363847e-01, -6.915749e-02, 8.202747e-04], [-6.915749e-02, 1.006357e+00, 6.138052e-02], [8.202747e-04, 6.138052e-02, 1.041954e+00]], rtol=1e-5) hs = wkk.Kernel('biwe').hmns(self.data[:2]) assert_allclose(hs, [[0.868428, -0.071705], [-0.071705, 1.04685]], rtol=1e-5) hs = wkk.Kernel('triwe').hmns(self.data[:2]) assert_allclose(hs, [[0.975375, -0.080535], [-0.080535, 1.17577]], rtol=1e-5) self.assertRaises(NotImplementedError, wkk.Kernel('biwe').hmns, self.data) self.assertRaises(NotImplementedError, wkk.Kernel('triwe').hmns, self.data) self.assertRaises(NotImplementedError, wkk.Kernel('triangular').hmns, self.data) def test_hscv(self): hs = self.gauss.hscv(self.data) assert_allclose(hs, [0.1656318800590673, 0.3273938258112911, 0.31072126996412214]) def test_hstt(self): hs = self.gauss.hstt(self.data) assert_allclose(hs, [0.18099075, 0.50409881, 0.11018912]) def test_hste(self): hs = self.gauss.hste(self.data) assert_allclose(hs, [0.17035204677390572, 0.29851960273788863, 0.186685349741972]) def test_hldpi(self): hs = self.gauss.hldpi(self.data) assert_allclose(hs, [0.1732289, 0.33159097, 0.3107633]) def test_hisj(self): hs = self.gauss.hisj(self.data) assert_allclose(hs, [0.29542502, 0.74277133, 0.51899114]) if __name__ == "__main__": # import sys;sys.argv = ['', 'Test.testName'] unittest.main()