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AUTHORS.rst
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==========
Developers
==========
* Per A. Brodtkorb
* Georg Lindgren
* David Verelst

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CHANGES.rst
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=========
Changelog
=========
Version 0.1
===========
- Feature A added
- FIX: nasty bug #1729 fixed
- add your changes here!

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LICENSE.txt
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WAFO is free software; you can redistribute it and/or modify it under the terms
of the GNU General Public License (GPL, http://www.gnu.org/copyleft/gpl.html)
as published by the Free Software Foundation; either version 3 of the License,
or (at your option) any later version.
WAFO is distributed in the hope that it will be useful, but WITHOUT ANY
WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
PARTICULAR PURPOSE.
A small number of files (listed in COPYRIGHTS) are distributed under the
GNU LESSER GENERAL PUBLIC LICENSE (LGPL, http://www.gnu.org/licenses/lgpl.html);
either version 3 of the License, or (at your option) any later version.
See the GNU General Public License for more details http://www.gnu.org/licenses/
We encourage you to submit new code for possible inclusion in future versions of
WAFO.

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README.rst
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==========================================
Wave Analysis for Fatigue and Oceanography
==========================================
Description
===========
WAFO is a toolbox Python routines for statistical analysis and simulation of
random waves and random loads. WAFO is freely redistributable software, see WAFO
icence, cf. the GNU General Public License (GPL) and contain tools for:
Fatigue Analysis
----------------
-Fatigue life prediction for random loads
-Theoretical density of rainflow cycles
Sea modelling
-------------
-Simulation of linear and non-linear Gaussian waves
-Estimation of seamodels (spectrums)
-Joint wave height, wave steepness, wave period distributions
Statistics
------------
-Extreme value analysis
-Kernel density estimation
-Hidden markov models
WAFO consists of several subpackages and classes with short descriptions given
below.
Classes:
TimeSeries - Data analysis of time series. Example: extraction of
turning points, estimation of spectrum and covariance function.
Estimation transformation used in transformed Gaussian model.
CovData - Computation of spectral functions, linear
and non-linear time series simulation.
SpecData - Computation of spectral moments and covariance functions, linear
and non-linear time series simulation.
Ex: common spectra implemented, directional spectra,
bandwidth measures, exact distributions for wave characteristics.
CyclePairs - Cycle counting, discretization, and crossings, calculation of
damage. Simulation of discrete Markov chains, switching Markov
chains, harmonic oscillator. Ex: Rainflow cycles and matrix,
discretization of loads. Damage of a rainflow count or
matrix, damage matrix, S-N plot.
Subpackages:
TRANSFORM - Modelling with linear or transformed Gaussian waves. Ex:
STATS - Statistical tools and extreme-value distributions.
Ex: generation of random numbers, estimation of parameters,
evaluation of pdf and cdf
KDETOOLS - Kernel-density estimation.
MISC - Miscellaneous routines.
DOCS - Documentation of toolbox, definitions. An overview is given
in the routine wafomenu.
DATA - Measurements from marine applications.
WAFO homepage: <http://www.maths.lth.se/matstat/wafo/>
On the WAFO home page you will find:
- The WAFO Tutorial
- New versions of WAFO to download.
- Reported bugs.
- List of publications related to WAFO.
Note
====
This project has been set up using PyScaffold 2.4.2. For details and usage
information on PyScaffold see http://pyscaffold.readthedocs.org/.

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docs/Makefile
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# Makefile for Sphinx documentation
#
# You can set these variables from the command line.
SPHINXOPTS =
SPHINXBUILD = sphinx-build
PAPER =
BUILDDIR = _build
# User-friendly check for sphinx-build
ifeq ($(shell which $(SPHINXBUILD) >/dev/null 2>&1; echo $?), 1)
$(error The '$(SPHINXBUILD)' command was not found. Make sure you have Sphinx installed, then set the SPHINXBUILD environment variable to point to the full path of the '$(SPHINXBUILD)' executable. Alternatively you can add the directory with the executable to your PATH. If you don't have Sphinx installed, grab it from http://sphinx-doc.org/)
endif
# Internal variables.
PAPEROPT_a4 = -D latex_paper_size=a4
PAPEROPT_letter = -D latex_paper_size=letter
ALLSPHINXOPTS = -d $(BUILDDIR)/doctrees $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) .
# the i18n builder cannot share the environment and doctrees with the others
I18NSPHINXOPTS = $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) .
.PHONY: help clean html dirhtml singlehtml pickle json htmlhelp qthelp devhelp epub latex latexpdf text man changes linkcheck doctest gettext
help:
@echo "Please use \`make <target>' where <target> is one of"
@echo " html to make standalone HTML files"
@echo " dirhtml to make HTML files named index.html in directories"
@echo " singlehtml to make a single large HTML file"
@echo " pickle to make pickle files"
@echo " json to make JSON files"
@echo " htmlhelp to make HTML files and a HTML help project"
@echo " qthelp to make HTML files and a qthelp project"
@echo " devhelp to make HTML files and a Devhelp project"
@echo " epub to make an epub"
@echo " latex to make LaTeX files, you can set PAPER=a4 or PAPER=letter"
@echo " latexpdf to make LaTeX files and run them through pdflatex"
@echo " latexpdfja to make LaTeX files and run them through platex/dvipdfmx"
@echo " text to make text files"
@echo " man to make manual pages"
@echo " texinfo to make Texinfo files"
@echo " info to make Texinfo files and run them through makeinfo"
@echo " gettext to make PO message catalogs"
@echo " changes to make an overview of all changed/added/deprecated items"
@echo " xml to make Docutils-native XML files"
@echo " pseudoxml to make pseudoxml-XML files for display purposes"
@echo " linkcheck to check all external links for integrity"
@echo " doctest to run all doctests embedded in the documentation (if enabled)"
clean:
rm -rf $(BUILDDIR)/*
html:
$(SPHINXBUILD) -b html $(ALLSPHINXOPTS) $(BUILDDIR)/html
@echo
@echo "Build finished. The HTML pages are in $(BUILDDIR)/html."
dirhtml:
$(SPHINXBUILD) -b dirhtml $(ALLSPHINXOPTS) $(BUILDDIR)/dirhtml
@echo
@echo "Build finished. The HTML pages are in $(BUILDDIR)/dirhtml."
singlehtml:
$(SPHINXBUILD) -b singlehtml $(ALLSPHINXOPTS) $(BUILDDIR)/singlehtml
@echo
@echo "Build finished. The HTML page is in $(BUILDDIR)/singlehtml."
pickle:
$(SPHINXBUILD) -b pickle $(ALLSPHINXOPTS) $(BUILDDIR)/pickle
@echo
@echo "Build finished; now you can process the pickle files."
json:
$(SPHINXBUILD) -b json $(ALLSPHINXOPTS) $(BUILDDIR)/json
@echo
@echo "Build finished; now you can process the JSON files."
htmlhelp:
$(SPHINXBUILD) -b htmlhelp $(ALLSPHINXOPTS) $(BUILDDIR)/htmlhelp
@echo
@echo "Build finished; now you can run HTML Help Workshop with the" \
".hhp project file in $(BUILDDIR)/htmlhelp."
qthelp:
$(SPHINXBUILD) -b qthelp $(ALLSPHINXOPTS) $(BUILDDIR)/qthelp
@echo
@echo "Build finished; now you can run "qcollectiongenerator" with the" \
".qhcp project file in $(BUILDDIR)/qthelp, like this:"
@echo "# qcollectiongenerator $(BUILDDIR)/qthelp/pywafo.qhcp"
@echo "To view the help file:"
@echo "# assistant -collectionFile $(BUILDDIR)/qthelp/pywafo.qhc"
devhelp:
$(SPHINXBUILD) -b devhelp $(ALLSPHINXOPTS) $(BUILDDIR)/devhelp
@echo
@echo "Build finished."
@echo "To view the help file:"
@echo "# mkdir -p $HOME/.local/share/devhelp/pywafo"
@echo "# ln -s $(BUILDDIR)/devhelp $HOME/.local/share/devhelp/pywafo"
@echo "# devhelp"
epub:
$(SPHINXBUILD) -b epub $(ALLSPHINXOPTS) $(BUILDDIR)/epub
@echo
@echo "Build finished. The epub file is in $(BUILDDIR)/epub."
latex:
$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
@echo
@echo "Build finished; the LaTeX files are in $(BUILDDIR)/latex."
@echo "Run \`make' in that directory to run these through (pdf)latex" \
"(use \`make latexpdf' here to do that automatically)."
latexpdf:
$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
@echo "Running LaTeX files through pdflatex..."
$(MAKE) -C $(BUILDDIR)/latex all-pdf
@echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex."
latexpdfja:
$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
@echo "Running LaTeX files through platex and dvipdfmx..."
$(MAKE) -C $(BUILDDIR)/latex all-pdf-ja
@echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex."
text:
$(SPHINXBUILD) -b text $(ALLSPHINXOPTS) $(BUILDDIR)/text
@echo
@echo "Build finished. The text files are in $(BUILDDIR)/text."
man:
$(SPHINXBUILD) -b man $(ALLSPHINXOPTS) $(BUILDDIR)/man
@echo
@echo "Build finished. The manual pages are in $(BUILDDIR)/man."
texinfo:
$(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo
@echo
@echo "Build finished. The Texinfo files are in $(BUILDDIR)/texinfo."
@echo "Run \`make' in that directory to run these through makeinfo" \
"(use \`make info' here to do that automatically)."
info:
$(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo
@echo "Running Texinfo files through makeinfo..."
make -C $(BUILDDIR)/texinfo info
@echo "makeinfo finished; the Info files are in $(BUILDDIR)/texinfo."
gettext:
$(SPHINXBUILD) -b gettext $(I18NSPHINXOPTS) $(BUILDDIR)/locale
@echo
@echo "Build finished. The message catalogs are in $(BUILDDIR)/locale."
changes:
$(SPHINXBUILD) -b changes $(ALLSPHINXOPTS) $(BUILDDIR)/changes
@echo
@echo "The overview file is in $(BUILDDIR)/changes."
linkcheck:
$(SPHINXBUILD) -b linkcheck $(ALLSPHINXOPTS) $(BUILDDIR)/linkcheck
@echo
@echo "Link check complete; look for any errors in the above output " \
"or in $(BUILDDIR)/linkcheck/output.txt."
doctest:
$(SPHINXBUILD) -b doctest $(ALLSPHINXOPTS) $(BUILDDIR)/doctest
@echo "Testing of doctests in the sources finished, look at the " \
"results in $(BUILDDIR)/doctest/output.txt."
xml:
$(SPHINXBUILD) -b xml $(ALLSPHINXOPTS) $(BUILDDIR)/xml
@echo
@echo "Build finished. The XML files are in $(BUILDDIR)/xml."
pseudoxml:
$(SPHINXBUILD) -b pseudoxml $(ALLSPHINXOPTS) $(BUILDDIR)/pseudoxml
@echo
@echo "Build finished. The pseudo-XML files are in $(BUILDDIR)/pseudoxml."

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docs/authors.rst
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.. _authors:
.. include:: ../AUTHORS.rst

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docs/changes.rst
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.. _changes:
.. include:: ../CHANGES.rst

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docs/conf.py
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# -*- coding: utf-8 -*-
#
# This file is execfile()d with the current directory set to its containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.
import sys
import os
import inspect
from sphinx import apidoc
__location__ = os.path.join(os.getcwd(), os.path.dirname(
inspect.getfile(inspect.currentframe())))
package = "wafo"
namespace = []
namespace_pkg = ".".join([namespace[-1], package]) if namespace else package
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
# sys.path.insert(0, os.path.abspath('.'))
# -- General configuration -----------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
# needs_sphinx = '1.0'
# Add any Sphinx extension module names here, as strings. They can be extensions
# coming with Sphinx (named 'sphinx.ext.*') or your custom ones.
extensions = ['sphinx.ext.autodoc', 'sphinx.ext.intersphinx', 'sphinx.ext.todo',
'sphinx.ext.autosummary', 'sphinx.ext.viewcode', 'sphinx.ext.coverage',
'sphinx.ext.doctest', 'sphinx.ext.ifconfig', 'sphinx.ext.pngmath']
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# The suffix of source filenames.
source_suffix = '.rst'
# The encoding of source files.
# source_encoding = 'utf-8-sig'
# The master toctree document.
master_doc = 'index'
# General information about the project.
project = u'pywafo'
copyright = u'2015, davidovitch'
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = '' # Is set by calling `setup.py docs`
# The full version, including alpha/beta/rc tags.
release = '' # Is set by calling `setup.py docs`
# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
# language = None
# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
# today = ''
# Else, today_fmt is used as the format for a strftime call.
# today_fmt = '%B %d, %Y'
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ['_build']
# The reST default role (used for this markup: `text`) to use for all documents.
# default_role = None
# If true, '()' will be appended to :func: etc. cross-reference text.
# add_function_parentheses = True
# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
# add_module_names = True
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
# show_authors = False
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
# -- Options for HTML output ---------------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
html_theme = 'alabaster'
# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
# html_theme_options = {}
# Add any paths that contain custom themes here, relative to this directory.
# html_theme_path = []
# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
try:
from namespace_pkg import __version__ as version
except ImportError:
pass
else:
release = version
# A shorter title for the navigation bar. Default is the same as html_title.
# html_short_title = None
# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
# html_logo = ""
# The name of an image file (within the static path) to use as favicon of the
# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
# html_favicon = None
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']
# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
# html_last_updated_fmt = '%b %d, %Y'
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
# html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
# html_sidebars = {}
# Additional templates that should be rendered to pages, maps page names to
# template names.
# html_additional_pages = {}
# If false, no module index is generated.
# html_domain_indices = True
# If false, no index is generated.
# html_use_index = True
# If true, the index is split into individual pages for each letter.
# html_split_index = False
# If true, links to the reST sources are added to the pages.
# html_show_sourcelink = True
# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
# html_show_sphinx = True
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
# html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
# html_use_opensearch = ''
# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
# Output file base name for HTML help builder.
htmlhelp_basename = 'wafo-doc'
# -- Options for LaTeX output --------------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
# 'papersize': 'letterpaper',
# The font size ('10pt', '11pt' or '12pt').
# 'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
# 'preamble': '',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title, author, documentclass [howto/manual]).
latex_documents = [
('index', 'user_guide.tex', u'pywafo Documentation',
u'davidovitch', 'manual'),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
# latex_logo = ""
# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
# latex_use_parts = False
# If true, show page references after internal links.
# latex_show_pagerefs = False
# If true, show URL addresses after external links.
# latex_show_urls = False
# Documents to append as an appendix to all manuals.
# latex_appendices = []
# If false, no module index is generated.
# latex_domain_indices = True
# -- External mapping ------------------------------------------------------------
python_version = '.'.join(map(str, sys.version_info[0:2]))
intersphinx_mapping = {
'sphinx': ('http://sphinx.pocoo.org', None),
'python': ('http://docs.python.org/' + python_version, None),
'matplotlib': ('http://matplotlib.sourceforge.net', None),
'numpy': ('http://docs.scipy.org/doc/numpy', None),
'sklearn': ('http://scikit-learn.org/stable', None),
'pandas': ('http://pandas.pydata.org/pandas-docs/stable', None),
'scipy': ('http://docs.scipy.org/doc/scipy/reference/', None),
}

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docs/index.rst
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======
pywafo
======
This is the documentation of **pywafo**.
.. note::
This is the main page of your project's `Sphinx <http://sphinx-doc.org/>`_
documentation. It is formatted in `reStructuredText
<http://sphinx-doc.org/rest.html>`__. Add additional pages by creating
rst-files in ``docs`` and adding them to the `toctree
<http://sphinx-doc.org/markup/toctree.html>`_ below. Use then
`references <http://sphinx-doc.org/markup/inline.html>`__ in order to link
them from this page, e.g. :ref:`authors <authors>` and :ref:`changes`.
It is also possible to refer to the documentation of other Python packages
with the `Python domain syntax
<http://sphinx-doc.org/domains.html#the-python-domain>`__. By default you
can reference the documentation of `Sphinx <http://sphinx.pocoo.org>`__,
`Python <http://docs.python.org/>`__, `matplotlib
<http://matplotlib.sourceforge.net>`__, `NumPy
<http://docs.scipy.org/doc/numpy>`__, `Scikit-Learn
<http://scikit-learn.org/stable>`__, `Pandas
<http://pandas.pydata.org/pandas-docs/stable>`__, `SciPy
<http://docs.scipy.org/doc/scipy/reference/>`__. You can add more by
extending the ``intersphinx_mapping`` in your Sphinx's ``conf.py``.
Contents
========
.. toctree::
:maxdepth: 2
License <license>
Authors <authors>
Changelog <changes>
Module Reference <api/modules>
Indices and tables
==================
* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`

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docs/license.rst
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.. _license:
=======
License
=======
.. literalinclude:: ../LICENSE.txt

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requirements.txt
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# Add your requirements here like:
six
numpy>=1.4
numdifftools>=0.2
scipy>=0.9

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setup.cfg
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[metadata]
name = wafo
summary = Wave Analysis for Fatigue and Oceanography
author = WAFO-group
author-email = none
license = GPLv3
home-page = http://www.maths.lth.se/matstat/wafo/
description-file = README.rst
# Add here all kinds of additional classifiers as defined under
# https://pypi.python.org/pypi?%3Aaction=list_classifiers
classifiers = Development Status :: 4 - Beta,
Programming Language :: Python,
Programming Language :: Python :: 2.7,
Programming Language :: Python :: 3,
Programming Language :: Python :: 3.3,
Programming Language :: Python :: 3.4,
Environment :: Console,
Intended Audience :: Education,
Intended Audience :: Science/Research,
License :: OSI Approved :: GPL License,
Operating System :: OS Independent,
Operating System :: POSIX :: Linux,
Operating System :: Unix,
Operating System :: MacOS,
Operating System :: Microsoft :: Windows
Topic :: Scientific/Engineering :: Mathematics
[entry_points]
# Add here console scripts like:
# console_scripts =
# hello_world = wafo.module:function
# as well as other entry_points.
[files]
# Add here 'data_files', 'packages' or 'namespace_packages'.
# Additional data files are defined as key value pairs of source and target:
packages =
wafo
# data_files =
# share/wafo_docs = docs/*
[extras]
# Add here additional requirements for extra features, like:
# PDF =
# ReportLab>=1.2
# RXP
[test]
# py.test options when running `python setup.py test`
addopts = tests
[pytest]
# Options for py.test:
# Specify command line options as you would do when invoking py.test directly.
# e.g. --cov-report html (or xml) for html/xml output or --junitxml junit.xml
# in order to write a coverage file that can be read by Jenkins.
addopts =
--cov wafo --cov-report term-missing
--verbose
[aliases]
docs = build_sphinx
[bdist_wheel]
# Use this option if your package is pure-python
universal = 0
[build_sphinx]
source_dir = docs
build_dir = docs/_build
[pbr]
# Let pbr run sphinx-apidoc
autodoc_tree_index_modules = True
# autodoc_tree_excludes = ...
# Let pbr itself generate the apidoc
# autodoc_index_modules = True
# autodoc_exclude_modules = ...
# Convert warnings to errors
# warnerrors = True
[devpi:upload]
# Options for the devpi: PyPI serer and packaging tool
# VCS export must be deactivated since we are using setuptools-scm
no-vcs = 1
format = bdist_wheel

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setup.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
Setup file for wafo.
This file was generated with PyScaffold 2.4.2, a tool that easily
puts up a scaffold for your new Python project. Learn more under:
http://pyscaffold.readthedocs.org/
"""
from __future__ import division, absolute_import, print_function
# numpy.distutils will figure out if setuptools is available when imported
# this allows us to combine setuptools use_pyscaffold=True and f2py extensions
import setuptools
from numpy.distutils.core import setup, Extension
import sys
def setup_package_pyscaffold():
extensions = []
c_lib_ext = Extension('wafo.c_library',
sources=['wafo/source/c_library/c_library.pyf',
'wafo/source/c_library/c_functions.c'])
extensions.append(c_lib_ext)
# rind_ext = Extension('wafo.rindmod',
# extra_objects=['wafo/source/rind2007/intmodule.f',
# 'wafo/source/rind2007/jacobmod.f',
# 'wafo/source/rind2007/swapmod.f',
# 'wafo/source/rind2007/fimod.f',
# 'wafo/source/rind2007/rindmod.f',
# 'wafo/source/rind2007/rind71mod.f'],
# sources=['wafo/source/rind2007/rind_interface.f'])
# extensions.append(rind_ext)
#
# mreg_ext = Extension('wafo.cov2mod',
# sources=['wafo/source/mreg/dsvdc.f',
# 'wafo/source/mreg/mregmodule.f',
# 'wafo/source/mreg/intfcmod.f',
# 'wafo/source/mreg/cov2mmpdfreg_intfc.f'],
# include_dirs=['wafo/source/rind2007'])
# extensions.append(mreg_ext)
mvn_ext = Extension('wafo.mvn',
sources=['wafo/source/mvn/mvn.pyf',
'wafo/source/mvn/mvndst.f'])
extensions.append(mvn_ext)
# mvnprd_ext = Extension('wafo.mvnprdmod',
# sources=['wafo/source/mvnprd/mvnprd.f',
# 'wafo/source/mvnprd/mvnprodcorrprb.f',
# 'wafo/source/mvnprd/mvnprd_interface.f'])
# extensions.append(mvnprd_ext)
needs_sphinx = {'build_sphinx', 'upload_docs'}.intersection(sys.argv)
sphinx = ['sphinx'] if needs_sphinx else []
setup(setup_requires=['six', 'pyscaffold>=2.4rc1,<2.5a0'] + sphinx,
tests_require=['pytest_cov', 'pytest'],
use_pyscaffold=True,
ext_modules=extensions)
if __name__ == "__main__":
setup_package_pyscaffold()

12
tests/conftest.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
Dummy conftest.py for wafo.
If you don't know what this is for, just leave it empty.
Read more about conftest.py under:
https://pytest.org/latest/plugins.html
"""
from __future__ import print_function, absolute_import, division
import pytest

17
wafo/setup.py
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# -*- coding: utf-8 -*-
"""
Created on Sun Oct 25 14:55:34 2015
@author: dave
"""
def configuration(parent_package='', top_path=None):
from numpy.distutils.misc_util import Configuration
config = Configuration('wafo', parent_package, top_path)
config.add_subpackage('source')
config.make_config_py()
return config
if __name__ == "__main__":
from numpy.distutils.core import setup
setup(**configuration(top_path='').todict())

4
wafo/version.py
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# THIS FILE IS GENERATED FROM SETUP.PY
short_version='0.1.2'
version='0.1.2'
release=False
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