From 96828915c8cbc409d7cbdd69b11005eef9d10066 Mon Sep 17 00:00:00 2001 From: Per A Brodtkorb Date: Wed, 29 Jun 2016 01:18:45 +0200 Subject: [PATCH] Fixed bugs in unittests --- wafo/tests/test_objects.py | 361 +++++++++++++++++++------------------ 1 file changed, 183 insertions(+), 178 deletions(-) diff --git a/wafo/tests/test_objects.py b/wafo/tests/test_objects.py index 0255924..63d5ea2 100644 --- a/wafo/tests/test_objects.py +++ b/wafo/tests/test_objects.py @@ -1,178 +1,183 @@ -# -*- coding:utf-8 -*- -""" -Created on 5. aug. 2010 - -@author: pab -""" - -import unittest -from numpy.testing import TestCase, assert_array_almost_equal -import wafo.data # @UnusedImport -import numpy as np # @UnusedImport -import wafo.objects as wo -import wafo.spectrum.models as sm -import wafo.transform.models as tm - - -class TestTimeSeries(TestCase): - def setUp(self): - x = wafo.data.sea() - self.ts = wo.mat2timeseries(x) - - def test_timeseries(self): - ts = self.ts - assert_array_almost_equal(ts.sampling_period(), 0.25) - - S = ts.tospecdata() - assert_array_almost_equal(S.data[:10], - [0.00913087, 0.00881073, 0.00791944, - 0.00664244, 0.00522429, 0.00389816, - 0.00282753, 0.00207843, 0.00162678, - 0.0013916]) - - rf = ts.tocovdata(lag=150) - assert_array_almost_equal(rf.data[:10], - [0.22368637, 0.20838473, 0.17110733, - 0.12237803, 0.07024054, 0.02064859, - -0.02218831, -0.0555993, -0.07859847, - -0.09166187]) - - def test_timeseries_trdata(self): - Hs = 7.0 - Sj = sm.Jonswap(Hm0=Hs) - S = Sj.tospecdata() # Make spectrum object from numerical values - S.tr = tm.TrOchi(mean=0, skew=0.16, kurt=0, sigma=Hs/4, ysigma=Hs/4) - xs = S.sim(ns=2**20, iseed=10) - ts = wo.mat2timeseries(xs) - g0, _gemp = ts.trdata(monitor=False) # Not Monitor the development - - # Equal weight on all points - g1, _gemp = ts.trdata(method='mnonlinear', gvar=0.5) - - # Less weight on the ends - g2, _gemp = ts.trdata(method='nonlinear', gvar=[3.5, 0.5, 3.5]) - self.assert_(1.2 < S.tr.dist2gauss() < 1.6) - self.assert_(1.65 < g0.dist2gauss() < 2.05) - self.assert_(0.54 < g1.dist2gauss() < 0.95) - self.assert_(1.5 < g2.dist2gauss() < 1.9) - - def test_timeseries_wave_periods(self): - true_t = ([-0.69, -0.86, -1.05], - [0.42, 0.78, 1.37], - [0.09, 0.51, -0.85], - [-0.27, -0.08, 0.32], - [3.84377468, 3.60707656, 3.90490909], - [6.25273295, 6.35295202, 6.11978685], - [2.48364668, 2.49282402, 2.50553431], - [3.76908628, 3.860128, 3.61425254], - [-5.05027968, -5.41405436, -5.35113091], - [7.53392635, 7.90687837, 7.85666522], - [-0.2811934, -0.86392635, -0.87687837], - [4.05027968, 4.72405436, 4.49113092], - [2.03999996, 0.07, 0.05], - [-0.93, -0.07, -0.12], - [1.10999996, 0., -0.07], - [-0.86, -0.02, 0.3], - [0.93, -0.8, -0.2]) - - pdefs = ['t2c', 'c2t', 't2t', 'c2c', - 'd2d', 'u2u', 'd2u', 'u2d', - 'd2t', 't2u', 'u2c', 'c2d', - 'm2M', 'M2m', 'm2m', 'M2M', 'all', - ] - ts = wo.TimeSeries(self.ts.data[0:400, :], self.ts.args[:400]) - for pdef, truth in zip(pdefs, true_t): - T, _ix = ts.wave_periods(vh=0.0, pdef=pdef) - # print(T[:3, 0]) - assert_array_almost_equal(T[:3, 0], truth) - - true_t2 = ([1.10999996, 0., - 0.07], - [-0.02, 0.3, - 0.34], - [6.10295202, 5.86978685, 6.08501107], - [6.25273295, 6.35295202, 6.11978685], - [-0.27, -0.08, 0.32], - [-0.27, -0.08, 0.32]) - wdefs = ['mw', 'Mw', 'dw', 'uw', 'tw', 'cw', ] - for wdef, truth in zip(wdefs, true_t2): - pdef = '{0}2{0}'.format(wdef[0].lower()) - T, _ix = ts.wave_periods(vh=0.0, pdef=pdef, wdef=wdef) - # print(T[:3, 0]) - assert_array_almost_equal(T[:3, 0], truth) - - -class TestObjects(TestCase): - def setUp(self): - x = wafo.data.sea() - self.ts = wo.mat2timeseries(x) - - def test_cycles_and_levelcrossings(self): - tp = self.ts.turning_points() - assert_array_almost_equal(tp.data[:10], - [-1.200495, 0.839505, -0.090495, -0.020495, - -0.090495, -0.040495, -0.160495, 0.259505, - -0.430495, -0.080495] - ) - - mm = tp.cycle_pairs() - assert_array_almost_equal(mm.data[:10], - [0.839505, -0.020495, -0.040495, 0.259505, - -0.080495, -0.080495, 0.349505, 0.859505, - 0.009505, 0.319505]) - true_lcs = (([0., 1., 2., 2., 3., 4., 5., 6., 7., 9.], - [-1.7504945, -1.4404945, -1.4204945, -1.4004945, - -1.3704945, -1.3204945, -1.2704945, -1.2604945, - -1.2504945, -1.2004945]), - ([0., 1., 2., 3., 3., 4., 5., 6., 7., 9.], - [-1.7504945, -1.4404945, -1.4204945, -1.4004945, - -1.3704945, -1.3204945, -1.2704945, -1.2604945, - -1.2504945, -1.2004945]), - ([1., 2., 3., 4., 4., 5., 6., 7., 9., 11.], - [-1.7504945, -1.4404945, -1.4204945, -1.4004945, - -1.3704945, -1.3204945, -1.2704945, -1.2604945, - -1.2504945, -1.2004945]), - ([1., 2., 3., 3., 4., 5., 6., 7., 9., 11.], - [-1.7504945, -1.4404945, -1.4204945, -1.4004945, - -1.3704945, -1.3204945, -1.2704945, -1.2604945, - -1.2504945, -1.2004945])) - for i, true_lc in enumerate(true_lcs): - true_count, true_levels = true_lc - lc = mm.level_crossings(kind=i+1) - assert_array_almost_equal(lc.data[:10], true_count) - assert_array_almost_equal(lc.args[:10], true_levels) - - def test_levelcrossings_extrapolate(self): - tp = self.ts.turning_points() - mm = tp.cycle_pairs() - lc = mm.level_crossings() - - s = lc.sigma # x[:, 1].std() - ix = slice(0, 1000, 100) - lc_ray = lc.extrapolate(-2 * s, 2 * s, dist='rayleigh') - - assert_array_almost_equal(lc_ray.data[ix], - [1.78925398e-37, 9.61028192e-23, - 2.05282628e-11, 1.74389448e-03, - 5.89169345e+01, 5.240000e+02, - 6.72609651e+01, 4.46086175e-01, - 2.23463577e-04, 8.45526153e-09]) - lc_exp = lc.extrapolate(-2 * s, 2 * s, dist='expon') - - lc_gpd = lc.extrapolate(-2 * s, 2 * s, dist='genpareto') - - assert_array_almost_equal(lc_exp.data[ix], - [6.51864195e-12, 1.13025876e-08, - 1.95974080e-05, 3.39796881e-02, - 5.89169345e+01, 5.24000000e+02, - 6.43476951e+01, 1.13478843e+00, - 2.00122906e-02, 3.52921977e-04]) - assert_array_almost_equal(lc_gpd.data[ix], - [0.00000000e+00, 0.00000000e+00, - 0.00000000e+00, 0.00000000e+00, - 5.89169345e+01, 5.24000000e+02, - 6.80484770e+01, 1.41019390e-01, - 0.00000000e+00, 0.00000000e+00]) - - -if __name__ == "__main__": - # import sys;sys.argv = ['', 'Test.testName'] - unittest.main() +# -*- coding:utf-8 -*- +""" +Created on 5. aug. 2010 + +@author: pab +""" + +import unittest +from numpy.testing import TestCase, assert_array_almost_equal +import wafo.data # @UnusedImport +import numpy as np # @UnusedImport +import wafo.objects as wo +import wafo.spectrum.models as sm +import wafo.transform.models as tm + + +class TestTimeSeries(TestCase): + def setUp(self): + x = wafo.data.sea() + self.ts = wo.mat2timeseries(x) + + def test_timeseries(self): + ts = self.ts + assert_array_almost_equal(ts.sampling_period(), 0.25) + + S = ts.tospecdata() + assert_array_almost_equal(S.data[:10], + [0.00913087, 0.00881073, 0.00791944, + 0.00664244, 0.00522429, 0.00389816, + 0.00282753, 0.00207843, 0.00162678, + 0.0013916]) + + rf = ts.tocovdata(lag=150) + assert_array_almost_equal(rf.data[:10], + [0.22368637, 0.20838473, 0.17110733, + 0.12237803, 0.07024054, 0.02064859, + -0.02218831, -0.0555993, -0.07859847, + -0.09166187]) + + def test_timeseries_trdata(self): + Hs = 7.0 + Sj = sm.Jonswap(Hm0=Hs) + S = Sj.tospecdata() # Make spectrum object from numerical values + S.tr = tm.TrOchi(mean=0, skew=0.16, kurt=0, sigma=Hs/4, ysigma=Hs/4) + xs = S.sim(ns=2**20, iseed=10) + ts = wo.mat2timeseries(xs) + g0, _gemp = ts.trdata(monitor=False) # Not Monitor the development + + # Equal weight on all points + g1, _gemp = ts.trdata(method='mnonlinear', gvar=0.5) + + # Less weight on the ends + g2, _gemp = ts.trdata(method='nonlinear', gvar=[3.5, 0.5, 3.5]) + self.assert_(1.2 < S.tr.dist2gauss() < 1.6) + self.assert_(1.65 < g0.dist2gauss() < 2.05) + self.assert_(0.54 < g1.dist2gauss() < 0.95) + self.assert_(1.5 < g2.dist2gauss() < 1.9) + + def test_timeseries_wave_periods(self): + true_t = ([-0.69, -0.86, -1.05], + [0.42, 0.78, 1.37], + [0.09, 0.51, -0.85], + [-0.27, -0.08, 0.32], + [3.84377468, 6.35707656, 4.15490909], + [6.25273295, 6.10295202, 3.36978685], + [2.48364668, 4.74282402, 1.75553431], + [3.76908628, 1.360128, 1.61425254], + [-5.05027968, -9.16405436, -15.60113092], + [7.53392635, 13.90687837, 17.35666522], + [-0.2811934, -7.11392635, -13.12687837], + [4.05027968, 8.47405436, 14.74113092], + [2.03999996, 0.07, 0.05], + [-0.93, -0.07, -0.12], + [1.10999996, 0., -0.07], + [-0.86, -0.02, 0.3], + [0.93, -0.8, -0.2], + [1.10999996, 0., -0.07], + [-0.02, 0.3, -0.34], + [6.10295202, 3.36978685, 3.58501107], + [6.25273295, 6.10295202, 3.36978685], + ) + + pdefs = ['t2c', 'c2t', 't2t', 'c2c', + 'd2d', 'u2u', 'd2u', 'u2d', + 'd2t', 't2u', 'u2c', 'c2d', + 'm2M', 'M2m', 'm2m', 'M2M', 'all', + ] + ts = wo.TimeSeries(self.ts.data[0:400, :2], self.ts.args[:400]) + for pdef, truth in zip(pdefs, true_t): + T, _ix = ts.wave_periods(vh=0.0, pdef=pdef) + # print(T[:3,]) + assert_array_almost_equal(T[:3], truth) + + true_t2 = ([1.10999996, 0., - 0.07], + [-0.02, 0.3, - 0.34], + [6.10295202, 3.369787, 3.585011], + [6.25273295, 6.102952, 3.369787], + [-0.27, -0.08, 0.32], + [-0.27, -0.08, 0.32]) + wdefs = ['mw', 'Mw', 'dw', 'uw', 'tw', 'cw', ] + for wdef, truth in zip(wdefs, true_t2): + pdef = '{0}2{0}'.format(wdef[0].lower()) + T, _ix = ts.wave_periods(vh=0.0, pdef=pdef, wdef=wdef) + print(T[:3]) + assert_array_almost_equal(T[:3], truth) + + +class TestObjects(TestCase): + def setUp(self): + x = wafo.data.sea() + self.ts = wo.mat2timeseries(x) + + def test_cycles_and_levelcrossings(self): + tp = self.ts.turning_points() + assert_array_almost_equal(tp.data[:10], + [-1.200495, 0.839505, -0.090495, -0.020495, + -0.090495, -0.040495, -0.160495, 0.259505, + -0.430495, -0.080495] + ) + + mm = tp.cycle_pairs() + assert_array_almost_equal(mm.data[:10], + [0.839505, -0.020495, -0.040495, 0.259505, + -0.080495, -0.080495, 0.349505, 0.859505, + 0.009505, 0.319505]) + true_lcs = (([0., 1., 2., 2., 3., 4., 5., 6., 7., 9.], + [-1.7504945, -1.4404945, -1.4204945, -1.4004945, + -1.3704945, -1.3204945, -1.2704945, -1.2604945, + -1.2504945, -1.2004945]), + ([0., 1., 2., 3., 3., 4., 5., 6., 7., 9.], + [-1.7504945, -1.4404945, -1.4204945, -1.4004945, + -1.3704945, -1.3204945, -1.2704945, -1.2604945, + -1.2504945, -1.2004945]), + ([1., 2., 3., 4., 4., 5., 6., 7., 9., 11.], + [-1.7504945, -1.4404945, -1.4204945, -1.4004945, + -1.3704945, -1.3204945, -1.2704945, -1.2604945, + -1.2504945, -1.2004945]), + ([1., 2., 3., 3., 4., 5., 6., 7., 9., 11.], + [-1.7504945, -1.4404945, -1.4204945, -1.4004945, + -1.3704945, -1.3204945, -1.2704945, -1.2604945, + -1.2504945, -1.2004945])) + for i, true_lc in enumerate(true_lcs): + true_count, true_levels = true_lc + lc = mm.level_crossings(kind=i+1) + assert_array_almost_equal(lc.data[:10], true_count) + assert_array_almost_equal(lc.args[:10], true_levels) + + def test_levelcrossings_extrapolate(self): + tp = self.ts.turning_points() + mm = tp.cycle_pairs() + lc = mm.level_crossings() + + s = lc.sigma # x[:, 1].std() + ix = slice(0, 1000, 100) + lc_ray = lc.extrapolate(-2 * s, 2 * s, dist='rayleigh') + + assert_array_almost_equal(lc_ray.data[ix], + [1.78925398e-37, 9.61028192e-23, + 2.05282628e-11, 1.74389448e-03, + 5.89169345e+01, 5.240000e+02, + 6.72609651e+01, 4.46086175e-01, + 2.23463577e-04, 8.45526153e-09]) + lc_exp = lc.extrapolate(-2 * s, 2 * s, dist='expon') + + lc_gpd = lc.extrapolate(-2 * s, 2 * s, dist='genpareto') + + assert_array_almost_equal(lc_exp.data[ix], + [6.51864195e-12, 1.13025876e-08, + 1.95974080e-05, 3.39796881e-02, + 5.89169345e+01, 5.24000000e+02, + 6.43476951e+01, 1.13478843e+00, + 2.00122906e-02, 3.52921977e-04]) + assert_array_almost_equal(lc_gpd.data[ix], + [0.00000000e+00, 0.00000000e+00, + 0.00000000e+00, 0.00000000e+00, + 5.89169345e+01, 5.24000000e+02, + 6.80484770e+01, 1.41019390e-01, + 0.00000000e+00, 0.00000000e+00]) + + +if __name__ == "__main__": + # import sys;sys.argv = ['', 'Test.testName'] + unittest.main()