SHELL=cmd ############################### # Load environment variables include .env export $(shell sed 's/=.*//' .env) CURRENT_DIR = $(shell pwd) ############################### # Create python virtual environment . PHONY: venv_init venv-init: ##@environment Setup virtual environment conda env create -f environment.yml --prefix=.venv python=3.7 venv-activate: ##@environment Activates the virtual environment activate $(CURRENT_DIR)/.venv venv-update: ##@environment Updates to latest packages conda update ipykernel && conda update --prefix .venv --all venv-requirements-install: ##@environment Ensures environment.yml packages are installed conda env update venv-requirements-export: ##@environment Exports current environment to environment.yml conda env export --file environment.yml ############################### # Get data from network drive .PHONY: push-data pull-data push-data: ##@data Copies data from ./data/ to data backup directory rclone copy ./data/ $(DATA_BACKUP_DIR) --exclude "*.las" --progress pull-data: ##@data Copies data from data backup directory to ./data/ # We probably don't want to pull the raw LIDAR .las files, so lets exclude them rclone copy $(DATA_BACKUP_DIR) ./data/ --exclude "*.las" --progress ############################### # Process data .PHONY: process-mat impacts: ./data/interim/impacts_forecasted_foreshore_slope_sto06.csv ./data/interim/impacts_forecasted_mean_slope_sto06.csv ./data/interim/impacts_observed.csv ##@products makes obsered and forecasted impacts # Calculates beach orientations at each profile ./data/raw/processed_shorelines/orientations.mat: ./data/raw/processed_shorelines/profiles.mat $(MATLAB_PATH) -nosplash -r "cd $(CURRENT_DIR); run('./src/data/beach_orientations.m'); quit" # # Produces a .csv of sites where our beach cross-sections are located # ./data/interim/sites.csv ./data/interim/profiles.csv: ./data/raw/processed_shorelines/profiles.mat # activate ./.venv && python ./src/data/parse_mat.py create-sites-and-profiles-csv \ # --profiles-mat "./data/raw/processed_shorelines/profiles.mat" \ # --profiles-output-file "./data/interim/profiles.csv" \ # --sites-output-file "./data/interim/sites.csv" # Produces a .csv of sites where our beach cross-sections are located ./data/interim/sites.csv ./data/interim/profiles.csv: ./data/raw/processed_shorelines/profiles.mat activate ./.venv && python ./src/cli.py create-sites-and-profiles-csv \ --profiles-mat "./data/raw/processed_shorelines/profiles.mat" \ --profiles-output-file "./data/interim/profiles.csv" \ --sites-output-file "./data/interim/sites.csv" # Produces a .csv of waves for each site ./data/interim/waves.csv: ./data/interim/sites.csv ./data/raw/processed_shorelines/waves.mat activate ./.venv && python ./src/cli.py create-waves-csv \ --waves-mat "./data/raw/processed_shorelines/waves.mat" \ --sites-csv "./data/interim/sites.csv" \ --output-file "./data/interim/waves.csv" # Produces a .csv of tides for each site ./data/interim/tides.csv: ./data/interim/sites.csv ./data/raw/processed_shorelines/tides.mat activate ./.venv && python ./src/cli.py create-tides-csv \ --tides-mat "./data/raw/processed_shorelines/tides.mat" \ --sites-csv "./data/interim/sites.csv" \ --output-file "./data/interim/tides.csv" # Creates a .shp of our sites to load into QGis ./data/interim/sites.shp: ./data/interim/sites.csv activate ./.venv && python ./src/cli.py sites-csv-to-shp \ --input-csv "./data/interim/sites.csv" \ --output-shp "./data/interim/sites.shp" # # Creates a .csv of our dune toe and crest profile features from .shp file # ./data/interim/profile_features.csv: ./data/raw/profile_features/dune_crests.shp ./data/raw/profile_features/dune_toes.shp ./data/interim/sites.csv ./data/interim/profiles.csv # activate ./.venv && python ./src/cli.py create-profile-features \ # --dune-crest-shp "./data/raw/profile_features/dune_crests.shp" \ # --dune-toe-shp "./data/raw/profile_features/dune_toes.shp" \ # --sites-csv "./data/interim/sites.csv" \ # --profiles-csv "./data/interim/profiles.csv" \ # --output-csv "./data/interim/profile_features.csv" # Create a .csv of our dune toe and crest profile features from Tom Beuzen's .mat file ./data/interim/profile_features.csv: ./data/raw/profile_features_tom_beuzen/*.mat ./data/interim/sites.csv activate ./.venv && python ./src/cli.py create-profile-features \ --crest-mat "./data/raw/profile_features_tom_beuzen/J16_DuneCrest.mat" \ --toe-mat "./data/raw/profile_features_tom_beuzen/J16_DuneToe.mat" \ --sites-csv "./data/interim/sites.csv" \ --output-file "./data/interim/profile_features.csv" # Creates a forecast of twl using sto06 and prestorm time varying prestorm foreshore slope ./data/interim/twl_foreshore_slope_sto06.csv: ./data/interim/waves.csv ./data/interim/tides.csv ./data/interim/profiles.csv ./data/interim/sites.csv ./data/interim/profile_features.csv activate ./.venv && python ./src/cli.py create-twl-forecast \ --waves-csv "./data/interim/waves.csv" \ --tides-csv "./data/interim/tides.csv" \ --profiles-csv "./data/interim/profiles.csv" \ --profile-features-csv "./data/interim/profile_features.csv" \ --runup-function "sto06" \ --slope "foreshore" \ --output-file "./data/interim/twl_foreshore_slope_sto06.csv" ./data/interim/twl_mean_slope_sto06.csv: ./data/interim/waves.csv ./data/interim/tides.csv ./data/interim/profiles.csv ./data/interim/sites.csv ./data/interim/profile_features.csv activate ./.venv && python ./src/cli.py create-twl-forecast \ --waves-csv "./data/interim/waves.csv" \ --tides-csv "./data/interim/tides.csv" \ --profiles-csv "./data/interim/profiles.csv" \ --profile-features-csv "./data/interim/profile_features.csv" \ --runup-function "sto06" \ --slope "mean" \ --output-file "./data/interim/twl_mean_slope_sto06.csv" ./data/interim/impacts_observed.csv: ./data/interim/profiles.csv ./data/interim/profile_features.csv activate ./.venv && python ./src/cli.py create-observed-impacts \ --profiles-csv "./data/interim/profiles.csv" \ --profile-features-csv "./data/interim/profile_features.csv" \ --output-file "./data/interim/impacts_observed.csv" ./data/interim/impacts_forecasted_mean_slope_sto06.csv: ./data/interim/profile_features.csv ./data/interim/twl_mean_slope_sto06.csv activate ./.venv && python ./src/cli.py create-forecasted-impacts \ --profile-features-csv "./data/interim/profile_features.csv" \ --forecasted-twl-csv "./data/interim/twl_mean_slope_sto06.csv" \ --output-file "./data/interim/impacts_forecasted_mean_slope_sto06.csv" ./data/interim/impacts_forecasted_foreshore_slope_sto06.csv: ./data/interim/profile_features.csv ./data/interim/twl_foreshore_slope_sto06.csv activate ./.venv && python ./src/cli.py create-forecasted-impacts \ --profile-features-csv "./data/interim/profile_features.csv" \ --forecasted-twl-csv "./data/interim/twl_foreshore_slope_sto06.csv" \ --output-file "./data/interim/impacts_forecasted_foreshore_slope_sto06.csv" ############################### # Misc commands format: ./src/*.py ##@misc Check python file formatting activate ./.venv && black --line-length 120 "src/" ############################### # Help command .DEFAULT_GOAL := help .PHONY: help # Refer to https://gist.github.com/prwhite/8168133 #COLORS GREEN := $(shell tput -Txterm setaf 2) WHITE := $(shell tput -Txterm setaf 7) YELLOW := $(shell tput -Txterm setaf 3) RESET := $(shell tput -Txterm sgr0) # Add the following 'help' target to your Makefile # And add help text after each target name starting with '\#\#' # A category can be added with @category HELP_FUN = \ %help; \ while(<>) { push @{$$help{$$2 // 'options'}}, [$$1, $$3] if /^([a-zA-Z\-]+)\s*:.*\#\#(?:@([a-zA-Z\-]+))?\s(.*)$$/ }; \ print "usage: make [target]\n\n"; \ for (sort keys %help) { \ print "${WHITE}$$_:${RESET}\n"; \ for (@{$$help{$$_}}) { \ $$sep = " " x (32 - length $$_->[0]); \ print " ${YELLOW}$$_->[0]${RESET}$$sep${GREEN}$$_->[1]${RESET}\n"; \ }; \ print "\n"; } help: ##@other Show this help. @perl -e '$(HELP_FUN)' $(MAKEFILE_LIST)