Refactor logging configuration

src/analysis/compare_impacts.py

@@ -6,7 +6,7 @@ import os
 
 import pandas as pd
 
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/analysis/forecast_twl.py

@@ -8,7 +8,7 @@ import pandas as pd
 from scipy import stats
 
 from analysis import runup_models
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/analysis/forecasted_storm_impacts.py

@@ -5,7 +5,7 @@ Estimates the forecasted storm impacts based on the forecasted water level and d
 import click
 import pandas as pd
 
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/analysis/observed_storm_impacts.py

@@ -3,7 +3,7 @@ import numpy as np
 import pandas as pd
 from scipy.integrate import simps
 
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/data/apply_manual_overwrites.py

@@ -5,7 +5,7 @@ After generating interim data files based on raw data, we may need to overwrite
 import pandas as pd
 import numpy as np
 import click
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/data/parse_mat.py

@@ -12,7 +12,7 @@ from mat4py import loadmat
 from shapely.geometry import Point
 
 from data.parse_shp import convert_coord_systems
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/data/parse_shp.py

@@ -9,7 +9,7 @@ from shapely.geometry import LineString, Point
 from shapely.geometry import shape
 from shapely.ops import transform
 
-from utils import setup_logging
+from logs import setup_logging
 
 logger = setup_logging()
 

src/logs.py

@@ -0,0 +1,17 @@
+import logging.config
+import os
+
+import yaml
+
+
+def setup_logging(path="./src/logging.yaml", default_level=logging.INFO):
+    """
+    Setup logging configuration
+    """
+    if os.path.exists(path):
+        with open(path, "rt") as f:
+            config = yaml.safe_load(f.read())
+        logging.config.dictConfig(config)
+    else:
+        logging.basicConfig(level=default_level)
+    return logging.getLogger(__name__)

src/utils.py

@@ -1,4 +1,3 @@
-import logging.config
 import os
 import yaml